Transcript: HECW1-IT1:1

Basic information

LNCipedia transcript ID: HECW1-IT1:1 
HGNC Gene Symbol: HECW1-IT1    
HGNC Full Gene Name: HECW1 intronic transcript 1
Ensembl Gene ID: ENSG00000181211
Ensembl Transcript ID: ENST00000322220
RefSeq ID: NR_135295
Location (hg38): chr7:43117896-43163187
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1839 bp
Exons: 7
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000322220.1; HECW1-IT1-001; OTTHUMT00000338770.1; NONHSAT120283; NR_135295.1
Alternative gene names: ENSG00000181211.1; HECW1-IT1; OTTHUMG00000155204.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.1547 non-coding 
CPAT coding probability 3.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HECW1-IT1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRPL32-1:1
4.0 HECW1-IT1:1
4.1 HECW1-IT1:1
5.0 HECW1-IT1:1
5.1 HECW1-IT1:1
5.2 HECW1-IT1:1