Transcript: HCG23:11

Basic information

LNCipedia transcript ID: HCG23:11 
LNCipedia gene ID: HCG23
Ensembl Gene ID: ENSG00000225914
Ensembl Transcript ID: ENST00000646176
Location (hg38): chr6:32255328-32265727
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3203 bp
Exons: 2
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000646176.1
Alternative gene names: ENSG00000225914.2; HCG23


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.2541 non-coding 
CPAT coding probability 13.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HCG23:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 HCG23:11
5.1 HCG23:11
5.2 HCG23:11