Transcript: HAO2-IT1:2

Basic information

LNCipedia transcript ID: HAO2-IT1:2 
LNCipedia gene ID: HAO2-IT1
Location (hg38): chr1:119368946-119370330
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 310 bp
Exons: 2
Sources: Refseq - Dec 2014
Alternative transcript names: NR_046780
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -234.7268 non-coding 
CPAT coding probability 13.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HAO2-IT1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HSD3B2-2:2
4.0 HAO2-IT1:2
4.1 HAO2-IT1:2
5.0 HAO2-IT1:2
5.1 HAO2-IT1:2
5.2 HAO2-IT1:2