Transcript: HAGLROS:1

Basic information

LNCipedia transcript ID: HAGLROS:1 
LNCipedia gene ID: HAGLROS
Location (hg38): chr2:176177710-176179004
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1124 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT075648
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -229.2154 non-coding 
CPAT coding probability 24.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HAGLROS:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HOXD3-1:3
4.0 HAGLROS:1
4.1 HAGLROS:1
5.0 HAGLROS:1
5.1 HAGLROS:1
5.2 HAGLROS:1