Transcript: GRPEL2-AS1:1

Basic information

LNCipedia transcript ID: GRPEL2-AS1:1 
HGNC Gene Symbol: GRPEL2-AS1    
HGNC Full Gene Name: GRPEL2 antisense RNA 1
Ensembl Gene ID: ENSG00000253618
Ensembl Transcript ID: ENST00000521295
RefSeq ID: NR_132366
Location (hg38): chr5:149348116-149357642
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 401 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000521295.1; RP11-394O4.4-001; OTTHUMT00000381679.1; NONHSAT104486; NR_132366.1
Alternative gene names: ENSG00000253618.1; RP11-394O4.4; OTTHUMG00000165071.1; GRPEL2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -150.9276 non-coding 
CPAT coding probability 3.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GRPEL2-AS1:1 yes no no no

Available literature

  1. Abdelmohsen (2013), Senescence-associated lncRNAs: senescence-associated long noncoding RNAs., Aging Cell


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL17B-1:1
4.0 GRPEL2-AS1:1
4.1 GRPEL2-AS1:1
5.0 GRPEL2-AS1:1
5.1 GRPEL2-AS1:1
5.2 GRPEL2-AS1:1