Transcript: GLYCTK-AS1:6

Basic information

LNCipedia transcript ID: GLYCTK-AS1:6 
HGNC Gene Symbol: GLYCTK-AS1    
HGNC Full Gene Name: GLYCTK antisense RNA 1
Ensembl Gene ID: ENSG00000242797
Ensembl Transcript ID: ENST00000624537
Location (hg38): chr3:52288580-52289276
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 697 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000481576.1; GLYCTK-AS1-002; OTTHUMT00000350825.1; NONHSAT089910; ENST00000624537.1
Alternative gene names: ENSG00000242797.1; GLYCTK-AS1; OTTHUMG00000158379.1; ENSG00000242797.3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -128.1571 non-coding 
CPAT coding probability 6.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GLYCTK-AS1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDR82-1:4
4.0 GLYCTK-AS1:6
4.1 GLYCTK-AS1:6
5.0 GLYCTK-AS1:6
5.1 GLYCTK-AS1:6
5.2 GLYCTK-AS1:6