Transcript: GLYCTK-AS1:5

Basic information

LNCipedia transcript ID: GLYCTK-AS1:5 
LNCipedia gene ID: GLYCTK-AS1
RefSeq ID: NR_046719
Location (hg38): chr3:52288580-52289733
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1154 bp
Exons: 1
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_046719; NR_046719.1
Alternative gene names: ; GLYCTK-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -128.1571 non-coding 
CPAT coding probability 6.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GLYCTK-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDR82-1:6
4.0 GLYCTK-AS1:5
4.1 GLYCTK-AS1:5
5.0 GLYCTK-AS1:5
5.1 GLYCTK-AS1:5
5.2 GLYCTK-AS1:5