Transcript: GLIDR:20

Basic information

LNCipedia transcript ID: GLIDR:20 
LNCipedia gene ID: GLIDR
Location (hg38): chr9:39807363-39810062
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2700 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000108369.1|FTMT23400003742.1
Alternative gene names: MGC21881; TCONS_00015562


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 89.7512 coding 
CPAT coding probability 1.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
GLIDR:20 no no no no

Available literature

  1. Zhang (2017), Increased expression of long non-coding RNA GLIDR in prostate cancer., Cancer Biomark
  2. Zhang (2013), A long non-coding RNA signature in glioblastoma multiforme predicts survival., Neurobiol. Dis.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 GLIDR:20
5.0 GLIDR:20
5.1 GLIDR:20
5.2 GLIDR:20