Transcript: GLIDR:12

Basic information

LNCipedia transcript ID: GLIDR:12 
LNCipedia gene ID: GLIDR
Location (hg38): chr9:39809470-39810035
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 451 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT131274
Alternative gene names: MGC21881; TCONS_00015562


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 38.0463 non-coding 
CPAT coding probability 20.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GLIDR:12 no no no no

Available literature

  1. Zhang (2017), Increased expression of long non-coding RNA GLIDR in prostate cancer., Cancer Biomark
  2. Zhang (2013), A long non-coding RNA signature in glioblastoma multiforme predicts survival., Neurobiol. Dis.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM75A4-2:6
4.0 GLIDR:12
4.1 GLIDR:12
5.0 GLIDR:12
5.1 GLIDR:12
5.2 GLIDR:12