Transcript: GLIDR:10

Basic information

LNCipedia transcript ID: GLIDR:10 
HGNC Gene Symbol: GLIDR    
HGNC Full Gene Name: glioblastoma down-regulated RNA
Ensembl Gene ID: ENSG00000278175
Ensembl Transcript ID: ENST00000618092
Location (hg38): chr9:39807381-39810058
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2581 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00015562; ENST00000377613; NONHSAT131270; NR_015363; ENST00000618092.2
Alternative gene names: XLOC_007690; linc-FAM75A7-3; ENSG00000204836; BX664615.1; ENSG00000278175.2; GLIDR; MGC21881; TCONS_00015562; ENSG00000278175.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 126.7711 coding 
CPAT coding probability 19.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
GLIDR:10 no no no no

Available literature

  1. Zhang (2017), Increased expression of long non-coding RNA GLIDR in prostate cancer., Cancer Biomark
  2. Zhang (2013), A long non-coding RNA signature in glioblastoma multiforme predicts survival., Neurobiol. Dis.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM75A4-2:1
3.1 lnc-FAM75A4-2:1
4.0 GLIDR:10
4.1 GLIDR:10
5.0 GLIDR:10
5.1 GLIDR:10
5.2 GLIDR:10