Transcript: GATA2-AS1:21

Basic information

LNCipedia transcript ID: GATA2-AS1:21 
LNCipedia gene ID: GATA2-AS1
RefSeq ID: NR_026954
Location (hg38): chr3:128507835-128510595
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2761 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_026954.1
Alternative gene names: LOC90246


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -29.1923 non-coding 
CPAT coding probability 5.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GATA2-AS1:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 GATA2-AS1:21
5.1 GATA2-AS1:21
5.2 GATA2-AS1:21