Transcript: GATA2-AS1:12

Basic information

LNCipedia transcript ID: GATA2-AS1:12 
LNCipedia gene ID: GATA2-AS1
Location (hg38): chr3:128488630-128541828
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4519 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000244300.2|MICT00000250114.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 46.2901 non-coding 
CPAT coding probability 0.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
GATA2-AS1:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 GATA2-AS1:12
5.0 GATA2-AS1:12
5.1 GATA2-AS1:12
5.2 GATA2-AS1:12