Transcript: GASAL1:31

Basic information

LNCipedia transcript ID: GASAL1:31 
LNCipedia gene ID: GASAL1
Location (hg38): chr8:102809719-102810721
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1003 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1839:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.0637 non-coding 
CPAT coding probability 34.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GASAL1:31 no no no no

Available literature

  1. Gasri-Plotnitsky (2017), A novel lncRNA, GASL1, inhibits cell proliferation and restricts E2F1 activity., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-KB-1507C5.2.1-3:7
4.1 lnc-KB-1507C5.2.1-3:7
5.0 lnc-KB-1507C5.2.1-3:7
5.1 GASAL1:16
5.2 GASAL1:31