Transcript: GAS6-DT:19

Basic information

LNCipedia transcript ID: GAS6-DT:19 
LNCipedia gene ID: GAS6-DT
Location (hg38): chr13:113864189-113866677
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1775 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00021917
Alternative gene names: XLOC_010514; linc-CDC16-5; FLJ44054


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.1002 non-coding 
CPAT coding probability 18.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GAS6-DT:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM70B-1:1
3.1 lnc-FAM70B-2:1
4.0 GAS6-AS2:3
4.1 GAS6-AS2:3
5.0 GAS6-AS2:3
5.1 GAS6-DT:9
5.2 GAS6-DT:19