Transcript: GAS6-DT:12

Basic information

LNCipedia transcript ID: GAS6-DT:12 
HGNC Gene Symbol: GAS6-DT    
HGNC Full Gene Name: GAS6 divergent transcript
Ensembl Gene ID: ENSG00000272695
Ensembl Transcript ID: ENST00000608651
Location (hg38): chr13:113864168-113866833
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1952 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608651.1
Alternative gene names: ENSG00000272695.1; GAS6-AS2; FLJ44054


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.1002 non-coding 
CPAT coding probability 18.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GAS6-DT:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM70B-2:4
4.0 GAS6-AS2:1
4.1 GAS6-AS2:1
5.0 GAS6-AS2:1
5.1 GAS6-DT:2
5.2 GAS6-DT:12