Transcript: GAS6-AS1:6

Basic information

LNCipedia transcript ID: GAS6-AS1:6 
HGNC Gene Symbol: GAS6-AS1    
HGNC Full Gene Name: GAS6 antisense RNA 1
Ensembl Gene ID: ENSG00000233695
Ensembl Transcript ID: ENST00000611082
Location (hg38): chr13:113842490-113844306
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1817 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000611082.1
Alternative gene names: ENSG00000233695.2; GAS6-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -26.8866 non-coding 
CPAT coding probability 57.33% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
GAS6-AS1:6 yes no no no

Available literature

  1. Han (2013), Low expression of long noncoding RNA GAS6-AS1 predicts a poor prognosis in patients with NSCLC., Med. Oncol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 GAS6-AS1:6
4.1 GAS6-AS1:6
5.0 GAS6-AS1:6
5.1 GAS6-AS1:6
5.2 GAS6-AS1:6