Transcript: FZD10-DT:47

Basic information

LNCipedia transcript ID: FZD10-DT:47 
LNCipedia gene ID: FZD10-DT
Location (hg38): chr12:130151586-130162223
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2922 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00020227
Alternative gene names: XLOC_010263; linc-TMEM132D-1; FLJ31485


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.2087 non-coding 
CPAT coding probability 18.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FZD10-DT:47 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RIMBP2-4:6
3.1 lnc-TMEM132D-3:7
4.0 FZD10-AS1:7
4.1 FZD10-AS1:7
5.0 FZD10-AS1:7
5.1 FZD10-DT:20
5.2 FZD10-DT:47