Transcript: FRMD6-AS1:5

Basic information

LNCipedia transcript ID: FRMD6-AS1:5 
LNCipedia gene ID: FRMD6-AS1
Ensembl Gene ID: ENSG00000277050
Ensembl Transcript ID: ENST00000616999
Location (hg38): chr14:51637348-51637947
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 600 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000616999.1
Alternative gene names: ENSG00000277050.1; RP11-102G14.1; ; AL122125.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -167.4301 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FRMD6-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP11-463J10.2.1-7:1
4.1 FRMD6-AS1:5
5.0 FRMD6-AS1:5
5.1 FRMD6-AS1:5
5.2 FRMD6-AS1:5