Transcript: FOXP1-AS1:1

Basic information

LNCipedia transcript ID: FOXP1-AS1:1 
LNCipedia gene ID: FOXP1-AS1
Location (hg38): chr3:71289757-71310767
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 767 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT090397
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -173.1008 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FOXP1-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR27-4:2
4.0 FOXP1-AS1:1
4.1 FOXP1-AS1:1
5.0 FOXP1-AS1:1
5.1 FOXP1-AS1:1
5.2 FOXP1-AS1:1