Transcript: FOXD3-AS1:5

Basic information

LNCipedia transcript ID: FOXD3-AS1:5 
LNCipedia gene ID: FOXD3-AS1
Location (hg38): chr1:63320886-63322491
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1229 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA110:3
Alternative gene names: pasFOXD3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -210.653 non-coding 
CPAT coding probability 2.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FOXD3-AS1:5 no no no no

Available literature

  1. Zhang (2017), Long noncoding RNA FOXD3-AS1 regulates oxidative stress-induced apoptosis <i>via</i> sponging microRNA-150., FASEB J.
  2. Chen (2016), Down-regulation of long non-coding RNA FOXD3 antisense RNA 1 (FOXD3-AS1) inhibits cell proliferation, migration, and invasion in malignant glioma cells., Am J Transl Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 FOXD3-AS1:5
4.1 FOXD3-AS1:5
5.0 FOXD3-AS1:5
5.1 FOXD3-AS1:5
5.2 FOXD3-AS1:5