Transcript: FLNC-AS1:11

Basic information

LNCipedia transcript ID: FLNC-AS1:11 
LNCipedia gene ID: FLNC-AS1
Location (hg38): chr7:128850162-128862626
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 559 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000242902.1|ENST00000469965.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -131.5772 non-coding 
CPAT coding probability 14.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FLNC-AS1:11 no no no no

Available literature

  1. Qian (2017), LncRNA expression profile of ΔNp63α in cervical squamous cancers and its suppressive effects on LIF expression., Cytokine
  2. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TNPO3-1:38
5.0 lnc-TNPO3-1:38
5.1 FLNC-AS1:6
5.2 FLNC-AS1:11