Transcript: FGF14-IT1:9

Basic information

LNCipedia transcript ID: FGF14-IT1:9 
LNCipedia gene ID: FGF14-IT1
Location (hg38): chr13:102293474-102367388
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 868 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000437115.1; FGF14-IT1-002; OTTHUMT00000045676.1; NONHSAT034997
Alternative gene names: ENSG00000243319.1; FGF14-IT1; OTTHUMG00000017301.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -204.2824 non-coding 
CPAT coding probability 3.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FGF14-IT1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-METTL21C-2:2
4.0 FGF14-IT1:9
4.1 FGF14-IT1:9
5.0 FGF14-IT1:9
5.1 FGF14-IT1:9
5.2 FGF14-IT1:9