Transcript: FGF14-AS2:2

Basic information

LNCipedia transcript ID: FGF14-AS2:2 
HGNC Gene Symbol: FGF14-AS2    
HGNC Full Gene Name: FGF14 antisense RNA 2
Ensembl Gene ID: ENSG00000272143
Ensembl Transcript ID: ENST00000606448
Location (hg38): chr13:102394630-102395703
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1074 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000606448.1
Alternative gene names: ENSG00000272143.1; FGF14-AS2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.8428 non-coding 
CPAT coding probability 9.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FGF14-AS2:2 no no no no

Available literature

  1. Yang (2016), A novel long non-coding RNA FGF14-AS2 is correlated with progression and prognosis in breast cancer., Biochem. Biophys. Res. Commun.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TPP2-6:2
4.0 FGF14-AS2:2
4.1 FGF14-AS2:2
5.0 FGF14-AS2:2
5.1 FGF14-AS2:2
5.2 FGF14-AS2:2