Transcript: FGF14-AS2:1

Basic information

LNCipedia transcript ID: FGF14-AS2:1 
LNCipedia gene ID: FGF14-AS2
RefSeq ID: NR_036487
Location (hg38): chr13:102394578-102395705
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1128 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT035000; NR_036487; NR_036487.1
Alternative gene names: ; FGF14-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.8428 non-coding 
CPAT coding probability 9.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FGF14-AS2:1 no no no no

Available literature

  1. Yang (2016), A novel long non-coding RNA FGF14-AS2 is correlated with progression and prognosis in breast cancer., Biochem. Biophys. Res. Commun.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TPP2-6:1
4.0 FGF14-AS2:1
4.1 FGF14-AS2:1
5.0 FGF14-AS2:1
5.1 FGF14-AS2:1
5.2 FGF14-AS2:1