Transcript: FGF12-AS1:1

Basic information

LNCipedia transcript ID: FGF12-AS1:1 
HGNC Gene Symbol: FGF12-AS1    
HGNC Full Gene Name: FGF12 antisense RNA 1
Ensembl Gene ID: ENSG00000231383
Ensembl Transcript ID: ENST00000530635
Location (hg38): chr3:192238037-192244987
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 555 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000530635.1; FGF12-AS1-002; OTTHUMT00000391130.1; NONHSAT093994
Alternative gene names: ENSG00000231383.2; FGF12-AS1; OTTHUMG00000156141.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -154.1862 non-coding 
CPAT coding probability 10.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FGF12-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PYDC2-4:1
4.0 FGF12-AS1:1
4.1 FGF12-AS1:1
5.0 FGF12-AS1:1
5.1 FGF12-AS1:1
5.2 FGF12-AS1:1