Transcript: FAM66B:3

Basic information

LNCipedia transcript ID: FAM66B:3 
HGNC Gene Symbol: FAM66B    
HGNC Full Gene Name: family with sequence similarity 66 member B
Ensembl Gene ID: ENSG00000215374
Ensembl Transcript ID: ENST00000606573
Location (hg38): chr8:7318540-7355339
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2630 bp
Exons: 6
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000606573.1
Alternative gene names: ENSG00000215374.5; FAM66B;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 16.3356 non-coding 
CPAT coding probability 6.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
FAM66B:3 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF705G-1:3
4.0 FAM66B:3
4.1 FAM66B:3
5.0 FAM66B:3
5.1 FAM66B:3
5.2 FAM66B:3