Transcript: FAM27E2:5

Basic information

LNCipedia transcript ID: FAM27E2:5 
LNCipedia gene ID: FAM27E2
Location (hg38): chr9:41648043-41648382
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 340 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT131438
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.7114 non-coding 
CPAT coding probability 4.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM27E2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM27D1.1-10:1
4.0 lnc-FAM27D1.1-10:1
4.1 lnc-FAM27D1.1-10:1
5.0 lnc-FAM27D1.1-10:1
5.1 FAM27E2:3
5.2 FAM27E2:5