Transcript: FAM242A:13

Basic information

LNCipedia transcript ID: FAM242A:13 
LNCipedia gene ID: FAM242A
Location (hg38): chr20:30324792-30331293
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 221 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028363; NONHSAT079271
Alternative gene names: XLOC_013717; linc-ZNF337-4; TCONS_00028363


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -73.4483 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM242A:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DEFB116-1:1
3.1 lnc-DEFB116-1:3
4.0 LINC01598:6
4.1 LINC01598:6
5.0 LINC01598:6
5.1 FAM242A:7
5.2 FAM242A:13