Transcript: FAM224B:1

Basic information

LNCipedia transcript ID: FAM224B:1 
HGNC Gene Symbol: FAM224B    
HGNC Full Gene Name: family with sequence similarity 224 member B
Ensembl Gene ID: ENSG00000230663
Ensembl Transcript ID: ENST00000458667
Location (hg38): chrY:17552800-17579754
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2032 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000458667; ENST00000458667.1; LINC00230B-001; OTTHUMT00000088613.1; NONHSAT139537
Alternative gene names: ENSG00000230663; NCRNA00230B; ENSG00000230663.1; LINC00230B; OTTHUMG00000036416.1; FAM224B;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 38.9985 non-coding 
CPAT coding probability 13.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM224B:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CDY2B-1:1
3.1 lnc-CDY2B-1:1
4.0 FAM224B:1
4.1 FAM224B:1
5.0 FAM224B:1
5.1 FAM224B:1
5.2 FAM224B:1