Transcript: FAM224A:1

Basic information

LNCipedia transcript ID: FAM224A:1 
HGNC Gene Symbol: FAM224A    
HGNC Full Gene Name: family with sequence similarity 224 member A
Ensembl Gene ID: ENSG00000233522
Ensembl Transcript ID: ENST00000419557
Location (hg38): chrY:18326253-18353210
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2031 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000419557; ENST00000419557.1; LINC00230A-001; OTTHUMT00000100025.1; NONHSAT139568
Alternative gene names: ENSG00000233522; NCRNA00230A; ENSG00000233522.1; LINC00230A; OTTHUMG00000041969.1; FAM224A;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 48.0104 non-coding 
CPAT coding probability 13.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
FAM224A:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HSFY1-1:1
3.1 lnc-HSFY1-3:1
4.0 FAM224A:1
4.1 FAM224A:1
5.0 FAM224A:1
5.1 FAM224A:1
5.2 FAM224A:1