Transcript: FAM182A:28

Basic information

LNCipedia transcript ID: FAM182A:28 
LNCipedia gene ID: FAM182A
Location (hg38): chr20:26009778-26051063
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 585 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000052963.1|FTMT27900017524.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 30.0215 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM182A:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM182A-4:14
5.0 lnc-FAM182A-4:14
5.1 FAM182A:7
5.2 FAM182A:28