Transcript: FAM157C:13

Basic information

LNCipedia transcript ID: FAM157C:13 
HGNC Gene Symbol: FAM157C    
HGNC Full Gene Name: family with sequence similarity 157 member C
Ensembl Gene ID: ENSG00000260528
Ensembl Transcript ID: ENST00000568070
Location (hg38): chr16:90106461-90177606
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 480 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT144645; ENST00000568070.1
Alternative gene names: ENSG00000260528.2; FAM157C; ENSG00000260528.3; ENSG00000260528.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 28.4771 non-coding 
CPAT coding probability 1.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM157C:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GAS8-3:2
4.0 lnc-GAS8-3:2
4.1 lnc-GAS8-3:2
5.0 lnc-GAS8-3:2
5.1 FAM157C:7
5.2 FAM157C:13