Transcript: EXTL3-AS1:8

Basic information

LNCipedia transcript ID: EXTL3-AS1:8 
LNCipedia gene ID: EXTL3-AS1
Location (hg38): chr8:28699695-28701317
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1387 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT125755
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.497 non-coding 
CPAT coding probability 1.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EXTL3-AS1:8 yes no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-INTS9-1:11
4.0 EXTL3-AS1:8
4.1 EXTL3-AS1:8
5.0 EXTL3-AS1:8
5.1 EXTL3-AS1:8
5.2 EXTL3-AS1:8