Transcript: ESRG:3

Basic information

LNCipedia transcript ID: ESRG:3 
LNCipedia gene ID: ESRG
Location (hg38): chr3:54632124-54632856
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 733 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT090017
Alternative gene names: HESRG


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.1896 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ESRG:3 yes no no no

Available literature

  1. Wanggou (2012), HESRG: a novel biomarker for intracranial germinoma and embryonal carcinoma., J. Neurooncol.
  2. Zhao (2007), Transcriptional profiling of human embryonic stem cells and embryoid bodies identifies HESRG, a novel stem cell gene., Biochem. Biophys. Res. Commun.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRTM1-3:3
4.0 ESRG:3
4.1 ESRG:3
5.0 ESRG:3
5.1 ESRG:3
5.2 ESRG:3