Transcript: EP300-AS1:2

Basic information

LNCipedia transcript ID: EP300-AS1:2 
LNCipedia gene ID: EP300-AS1
Location (hg38): chr22:41185215-41197501
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1377 bp
Exons: 3
Sources: Refseq - Dec 2014
Alternative transcript names: NR_110514
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.4636 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EP300-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHADL-2:2
4.0 EP300-AS1:2
4.1 EP300-AS1:2
5.0 EP300-AS1:2
5.1 EP300-AS1:2
5.2 EP300-AS1:2