Transcript: ELOA-AS1:22

Basic information

LNCipedia transcript ID: ELOA-AS1:22 
HGNC Gene Symbol: ELOA-AS1    
HGNC Full Gene Name: ELOA antisense RNA 1
Ensembl Gene ID: ENSG00000236810
Ensembl Transcript ID: ENST00000427796
Location (hg38): chr1:23760382-23778287
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1074 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000427796.1; RP5-886K2.3-001; OTTHUMT00000008241.1; ENST00000427796.5
Alternative gene names: ENSG00000236810.1; RP5-886K2.3; OTTHUMG00000002959.1; ENSG00000236810.5; TCEB3-AS1; ; ELOA-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.4445 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ELOA-AS1:22 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GALE-1:1
4.0 TCEB3-AS1:3
4.1 TCEB3-AS1:3
5.0 TCEB3-AS1:3
5.1 ELOA-AS1:10
5.2 ELOA-AS1:22