Transcript: EGFLAM-AS4:2

Basic information

LNCipedia transcript ID: EGFLAM-AS4:2 
LNCipedia gene ID: EGFLAM-AS4
RefSeq ID: NR_046219
Location (hg38): chr5:38282269-38290986
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1574 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_046219; NR_046219.1
Alternative gene names: ; EGFLAM-AS4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.1631 non-coding 
CPAT coding probability 8.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EGFLAM-AS4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LIFR-5:2
4.0 EGFLAM-AS4:2
4.1 EGFLAM-AS4:2
5.0 EGFLAM-AS4:2
5.1 EGFLAM-AS4:2
5.2 EGFLAM-AS4:2