Transcript: EDRF1-AS1:34

Basic information

LNCipedia transcript ID: EDRF1-AS1:34 
LNCipedia gene ID: EDRF1-AS1
Location (hg38): chr10:125706946-125709249
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 880 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019045; NONHSAT016900
Alternative gene names: XLOC_008982; linc-C10orf122-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -145.333 non-coding 
CPAT coding probability 3.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EDRF1-AS1:34 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C10orf122-1:6
3.1 lnc-C10orf122-1:11
4.0 EDRF1-AS1:34
4.1 EDRF1-AS1:34
5.0 EDRF1-AS1:34
5.1 EDRF1-AS1:34
5.2 EDRF1-AS1:34