Transcript: EDRF1-AS1:20

Basic information

LNCipedia transcript ID: EDRF1-AS1:20 
LNCipedia gene ID: EDRF1-AS1
Location (hg38): chr10:125709529-125719587
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 205 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA226:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -304.0076 non-coding 
CPAT coding probability 2.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EDRF1-AS1:20 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 EDRF1-AS1:20
4.1 EDRF1-AS1:20
5.0 EDRF1-AS1:20
5.1 EDRF1-AS1:20
5.2 EDRF1-AS1:20