Transcript: EDNRB-AS1:1

Basic information

LNCipedia transcript ID: EDNRB-AS1:1 
LNCipedia gene ID: EDNRB-AS1
Location (hg38): chr13:77817139-77843010
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2814 bp
Exons: 6
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT034425; FPKM1_group_8135_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -27.5964 non-coding 
CPAT coding probability 1.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EDNRB-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLAIN1-1:2
4.0 EDNRB-AS1:1
4.1 EDNRB-AS1:1
5.0 EDNRB-AS1:1
5.1 EDNRB-AS1:1
5.2 EDNRB-AS1:1