Transcript: EAF1-AS1:11

Basic information

LNCipedia transcript ID: EAF1-AS1:11 
LNCipedia gene ID: EAF1-AS1
Location (hg38): chr3:15439069-15440594
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 469 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000494875.2; EAF1-AS1-001; OTTHUMT00000343950.2
Alternative gene names: ENSG00000249786.1; EAF1-AS1; OTTHUMG00000129858.4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -119.1368 non-coding 
CPAT coding probability 1.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EAF1-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COLQ-1:1
4.0 EAF1-AS1:11
4.1 EAF1-AS1:11
5.0 EAF1-AS1:11
5.1 EAF1-AS1:11
5.2 EAF1-AS1:11