Transcript: DSCR4:4

Basic information

LNCipedia transcript ID: DSCR4:4 
HGNC Gene Symbol: DSCR4    
HGNC Full Gene Name: Down syndrome critical region 4
Ensembl Gene ID: ENSG00000184029
Ensembl Transcript ID: ENST00000482032
Location (hg38): chr21:38093244-38121331
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 799 bp
Exons: 6
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000482032.1
Alternative gene names: ENSG00000184029.9; DSCR4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -15.8411 non-coding 
CPAT coding probability 7.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DSCR4:4 yes no no no

Available literature

  1. Saber (2016), Emergence and Evolution of Hominidae-Specific Coding and Noncoding Genomic Sequences., Genome Biol Evol
  2. Nakamura (1997), A novel gene isolated from human placenta located in Down syndrome critical region on chromosome 21., DNA Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 DSCR4:4
5.1 DSCR4:4
5.2 DSCR4:4