Transcript: DNAJC3-DT:21

Basic information

LNCipedia transcript ID: DNAJC3-DT:21 
HGNC Gene Symbol: DNAJC3-DT    
HGNC Full Gene Name: DNAJC3 divergent transcript
Ensembl Gene ID: ENSG00000247400
Ensembl Transcript ID: ENST00000499499
RefSeq ID: NR_132117
Location (hg38): chr13:95672835-95676925
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2908 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000499499; ENST00000499499.2; DNAJC3-AS1-001; OTTHUMT00000388111.1; NONHSAT034768; NR_132117.1
Alternative gene names: ENSG00000247400; DNAJC3-AS1; ENSG00000247400.2; OTTHUMG00000166152.1; ENSG00000247400.3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.1642 non-coding 
CPAT coding probability 8.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DNAJC3-DT:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DZIP1-1:2
3.1 lnc-DZIP1-1:2
4.0 DNAJC3-AS1:3
4.1 DNAJC3-AS1:3
5.0 DNAJC3-AS1:3
5.1 DNAJC3-DT:10
5.2 DNAJC3-DT:21