Transcript: DLX2-DT:3

Basic information

LNCipedia transcript ID: DLX2-DT:3 
HGNC Gene Symbol: DLX2-DT    
HGNC Full Gene Name: DLX2 divergent transcript
Ensembl Gene ID: ENSG00000236651
Ensembl Transcript ID: ENST00000448117
RefSeq ID: NR_126376
Location (hg38): chr2:172103006-172109982
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 950 bp
Exons: 5
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00003049; ENST00000448117.1; AC104801.1-001; OTTHUMT00000333690.2; NONHSAT075491; NR_126376; NR_126376.1
Alternative gene names: XLOC_001755; linc-ITGA6-3; ENSG00000236651.1; AC104801.1; OTTHUMG00000154065.2; DLX2-AS1; TCONS_00003049


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.2205 non-coding 
CPAT coding probability 6.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DLX2-DT:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DLX1-1:1
3.1 lnc-DLX1-1:1
4.0 DLX2-AS1:1
4.1 DLX2-AS1:1
5.0 DLX2-AS1:1
5.1 DLX2-DT:2
5.2 DLX2-DT:3