Transcript: DIO3OS:23

Basic information

LNCipedia transcript ID: DIO3OS:23 
LNCipedia gene ID: DIO3OS
Location (hg38): chr14:101557304-101560392
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 3089 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000258498.2|ENST00000554735.1
Alternative gene names: NCRNA00041; DIO3-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -119.7281 non-coding 
CPAT coding probability 78.67% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
DIO3OS:23 no no no no

Available literature

  1. Mirza (2015), Transcriptomic landscape of lncRNAs in inflammatory bowel disease., Genome Med
  2. Zhang (2015), Cancer Specific Long Noncoding RNAs Show Differential Expression Patterns and Competing Endogenous RNA Potential in Hepatocellular Carcinoma., PLoS ONE
  3. Hernandez (2007), Gene expression from the imprinted Dio3 locus is associated with cell proliferation of cultured brown adipocytes., Endocrinology
  4. Kester (2006), Regulation of type III iodothyronine deiodinase expression in human cell lines., Endocrinology
  5. Tierling (2006), High-resolution map and imprinting analysis of the Gtl2-Dnchc1 domain on mouse chromosome 12., Genomics
  6. Hernandez (2004), Complex organization and structure of sense and antisense transcripts expressed from the DIO3 gene imprinted locus., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 DIO3OS:23
5.0 DIO3OS:23
5.1 DIO3OS:23
5.2 DIO3OS:23