Transcript: DICER1-AS1:2

Basic information

LNCipedia transcript ID: DICER1-AS1:2 
LNCipedia gene ID: DICER1-AS1
Location (hg38): chr14:95157645-95179926
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1702 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000554631; ENST00000554631.1; DICER1-AS1-004; OTTHUMT00000414516.1
Alternative gene names: ENSG00000235706; AL356017.3; ENSG00000235706.3; DICER1-AS1; OTTHUMG00000150190.2; FLJ45244; DICER1-AS


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.4756 non-coding 
CPAT coding probability 8.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DICER1-AS1:2 yes no no no

Available literature

  1. Gu (2018), LncRNA DICER1-AS1 promotes the proliferation, invasion and autophagy of osteosarcoma cells via miR-30b/ATG5., Biomed. Pharmacother.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-1070N10.3.1-3:1
3.1 lnc-RP11-1070N10.3.1-3:1
4.0 DICER1-AS1:2
4.1 DICER1-AS1:2
5.0 DICER1-AS1:2
5.1 DICER1-AS1:2
5.2 DICER1-AS1:2