Transcript: DIAPH3-AS2:3

Basic information

LNCipedia transcript ID: DIAPH3-AS2:3 
HGNC Gene Symbol: DIAPH3-AS2    
HGNC Full Gene Name: DIAPH3 antisense RNA 2
Ensembl Gene ID: ENSG00000223815
Ensembl Transcript ID: ENST00000428656
RefSeq ID: NR_046540
Location (hg38): chr13:60144698-60153505
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 367 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000428656.1; DIAPH3-AS2-001; OTTHUMT00000045165.1; NR_046540; NR_046540.1
Alternative gene names: ENSG00000223815.1; DIAPH3-AS2; OTTHUMG00000017003.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -151.124 non-coding 
CPAT coding probability 1.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DIAPH3-AS2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TDRD3-2:1
4.0 DIAPH3-AS2:3
4.1 DIAPH3-AS2:3
5.0 DIAPH3-AS2:3
5.1 DIAPH3-AS2:3
5.2 DIAPH3-AS2:3