Transcript: DIAPH2-AS1:7

Basic information

LNCipedia transcript ID: DIAPH2-AS1:7 
LNCipedia gene ID: DIAPH2-AS1
Location (hg38): chrX:97431258-97564493
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1128 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000439759.1; DIAPH2-AS1-002; OTTHUMT00000057467.1; NONHSAT137865
Alternative gene names: ENSG00000236256.4; DIAPH2-AS1; OTTHUMG00000021989.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -107.5962 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DIAPH2-AS1:7 yes no no no

Available literature

  1. Dizikes (1995), The lymphoid proliferation-associated gene EPAG maps to human chromosome region Xq21-->q22., Cytogenet. Cell Genet.
  2. Bennett (1994), Properties of a novel gene isolated from a Hodgkin's disease cell line that is expressed early during lymphoid cell activation., J. Immunol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCDH19-1:4
4.0 DIAPH2-AS1:7
4.1 DIAPH2-AS1:7
5.0 DIAPH2-AS1:7
5.1 DIAPH2-AS1:7
5.2 DIAPH2-AS1:7