Transcript: DIAPH2-AS1:4

Basic information

LNCipedia transcript ID: DIAPH2-AS1:4 
LNCipedia gene ID: DIAPH2-AS1
RefSeq ID: NR_125391
Location (hg38): chrX:97528364-97564535
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 977 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125391; NR_125391.1
Alternative gene names: ; DIAPH2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.8469 non-coding 
CPAT coding probability 0.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DIAPH2-AS1:4 yes no no no

Available literature

  1. Dizikes (1995), The lymphoid proliferation-associated gene EPAG maps to human chromosome region Xq21-->q22., Cytogenet. Cell Genet.
  2. Bennett (1994), Properties of a novel gene isolated from a Hodgkin's disease cell line that is expressed early during lymphoid cell activation., J. Immunol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCDH19-1:7
4.0 DIAPH2-AS1:4
4.1 DIAPH2-AS1:4
5.0 DIAPH2-AS1:4
5.1 DIAPH2-AS1:4
5.2 DIAPH2-AS1:4