Transcript: DHRS4-AS1:23

Basic information

LNCipedia transcript ID: DHRS4-AS1:23 
LNCipedia gene ID: DHRS4-AS1
Location (hg38): chr14:23940363-23953669
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1157 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000215256.3|ENST00000399886.2
Alternative gene names: PRO1488; AS1DHRS4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.4696 non-coding 
CPAT coding probability 2.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DHRS4-AS1:23 yes no no no

Available literature

  1. Yang (2016), Enhancer RNA-driven looping enhances the transcription of the long noncoding RNA DHRS4-AS1, a controller of the DHRS4 gene cluster., Sci Rep
  2. Li (2012), AS1DHRS4, a head-to-head natural antisense transcript, silences the DHRS4 gene cluster in cis and trans., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 DHRS4-AS1:23
5.0 DHRS4-AS1:23
5.1 DHRS4-AS1:23
5.2 DHRS4-AS1:23